Several accessory functions have been added over time (plasmid drawing, restriction mapping, ABI and SCF viewing, RNA comparative analysis and graphical annotation among other features).User-defined character-relevance (any characters can be set to be considered as relevant bases in nucleic acid or amino acid sequences for the purposes of similarity shading, sequence identity matrices, and conservation plot views.Group sequences into color-coded families and lock group members for synchronized hand alignment.Automatically annotate other sequences in an alignment using one sequence as a template. Automatically and manually annotate sequences with features such as introns, exons, promoters, CDS, and all standard Gen.Anchor alignment columns to protect fixed regions in an alignment.
Variable editing options, including ‘select and drag’ sliding and 'grab and drag' sliding of residues, variable selection options, mouse-click insert and delete of gaps, full column selecting, on-screen editing with cut, copy and paste, and auto-scrolling of edit window.An easy, graphical interface for sequence manipulation and editing.
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